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Image processing for 3D-EM.

 

Software:

  1. AMIRA2021 machine learning module for Volume SEM
  2. ilastik (in preparation)
  3. Inspect 3D for tomography
  4. IMOD for tomography
  5. RELION for single-particle analysis & 3D model

 

MRC-TU Cryo-EM GPU Server (since 2018)

CPU: Intel Xeon E5-2690V4 - 2.6 GHz - 14-core

GPU: Nvidia GTX 1080Ti x 4 cards

RAM: 4x32GB DDR4

SSD: 512GB SSD & 1TB SSD

HDD: 6x8TB Enterprise grade HDD

 

Dell Precision 3640 Tower Workstation (since 2021)

CPU: Intel Core i9 (10th Gen) 10900K - 3.7 GHZ (5.3 GHz) - 10-core

GPU: NVIDIA Quadro RTX 4000, 3DP Virtual Link

RAM: 32GB 

SSD: 512MB

HDD: 8TB 7200rpm SATA Enterprise

Display: Wacom Cintiq 27 QHD touch

 

Apple Mac Pro (since 2015)

Group Members

Jaime Llodra Gonzalez

EM Research Specialist

jl2235@mrc-tox.cam.ac.uk

 

Maria Guerra Martin

Senior Research Officer

mag88@mrc-tox.cam.ac.uk

 

Nobuhiro Morone

Senior Investigator Scientist

Facility Head

nm669@mrc-tox.cam.ac.uk